Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6226

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6226: 14594 - Hypothetical Protein, at 297535 to 298697 14594 mRNA_6227: 14595 - BLAST DEAD box helicase [Trichophyton violaceum], at 299664 to 299897 14595

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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296,569 + -1.3
296,579 + 0.5
296,587 - 2.3
296,595 - 1.3
296,604 - -0.5
296,604 + 1.8
296,617 + 0.6
296,624 - 1.0
296,713 + 0.9
296,738 - -0.0
296,752 - 0.8
297,301 + 1.0
297,345 + -0.5
297,739 + 14594 mRNA_6226 0.18 0.1
297,750 + 14594 mRNA_6226 0.18 -0.1
297,778 + 14594 mRNA_6226 0.21 1.2
297,778 - 14594 mRNA_6226 0.21 2.1
298,489 + 14594 mRNA_6226 0.82 1.7
298,626 - -0.9
298,640 - 0.7
298,664 + -0.4
298,755 + -1.2
298,756 - -0.1
298,757 + 1.2
298,764 + 2.9
298,953 + 1.2
299,024 + 1.1
299,095 - 1.4
299,099 - 0.5
299,105 + -0.3
299,105 - 2.4
299,106 + 2.8
299,147 - 0.4
299,151 + 0.1
299,159 - 0.5
299,160 + 0.5
299,205 + -0.6
299,207 - 2.5
299,230 + -0.5