Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6204

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6203: 14571 - HMMPfam-HbrB-like-PF08539, at 240769 to 243130 14571 mRNA_6204: 14572 - KOG1618 Predicted phosphatase, at 243307 to 244867 14572 mRNA_6205: 14573 - HMMPfam-Peptidase M50B-like-PF13398, at 244969 to 246074 14573

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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242,920 - -0.0
243,072 - -1.2
243,082 + 2.0
243,200 + 0.6
243,232 + -0.3
243,240 + 0.4
243,242 + 1.1
243,268 + -0.1
243,394 - -0.3
243,512 + 14572 mRNA_6204 0.13 1.5
243,765 + 14572 mRNA_6204 0.29 -0.2
243,925 - 14572 mRNA_6204 0.40 2.1
243,956 + 14572 mRNA_6204 0.42 1.5
243,996 - 14572 mRNA_6204 0.44 0.7
244,140 + 14572 mRNA_6204 0.53 -1.1
244,383 + 14572 mRNA_6204 0.69 1.0
244,656 - 14572 mRNA_6204 0.86 0.2
245,105 + 14573 mRNA_6205 0.12 1.0
245,253 - 14573 mRNA_6205 0.26 0.6
245,256 - 14573 mRNA_6205 0.26 -0.4
245,256 + 14573 mRNA_6205 0.26 2.3
245,543 - 14573 mRNA_6205 0.52 0.3
245,658 + 14573 mRNA_6205 0.62 1.4