Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6201

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6200: 14568 - Hypothetical Protein, at 233137 to 235524 14568 mRNA_6201: 14569 - Hypothetical Protein, at 236476 to 237020 14569 mRNA_6202: 14570 - KOG4475 FOG Immunoglobin and related proteins, at 237374 to 240451 14570

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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235,559 + 0.4
235,572 - -0.3
235,575 - 0.6
235,575 + -0.1
235,579 - 0.4
235,608 + 0.1
235,615 - -0.5
235,631 - 0.3
235,633 - 0.4
235,634 + 2.4
235,701 + 2.0
235,775 + 2.0
236,071 - 0.0
236,081 - -0.7
236,229 + -0.6
236,234 - 1.5
236,311 - -0.7
236,359 + 1.5
236,371 - -1.2
236,377 + -0.3
236,507 - -0.7
236,539 + 14569 mRNA_6201 0.12 1.0
236,540 - 14569 mRNA_6201 0.12 -0.2
236,549 + 14569 mRNA_6201 0.13 -1.3
236,561 - 14569 mRNA_6201 0.16 1.1
236,565 - 14569 mRNA_6201 0.16 -0.6
236,568 + 14569 mRNA_6201 0.17 -0.5
236,588 - 14569 mRNA_6201 0.21 1.9
236,637 + 14569 mRNA_6201 0.30 0.8
236,649 - 14569 mRNA_6201 0.32 0.3
236,676 + 14569 mRNA_6201 0.37 0.5
236,683 + 14569 mRNA_6201 0.38 1.3
236,703 - 14569 mRNA_6201 0.42 -0.3
236,707 + 14569 mRNA_6201 0.42 1.7
236,720 + 14569 mRNA_6201 0.45 0.5
236,720 + 14569 mRNA_6201 0.45 -0.1
236,740 - 14569 mRNA_6201 0.48 0.4
236,813 - 14569 mRNA_6201 0.62 1.5
236,823 + 14569 mRNA_6201 0.64 0.2
236,842 - 14569 mRNA_6201 0.67 0.7
236,848 + 14569 mRNA_6201 0.68 -0.2
236,852 + 14569 mRNA_6201 0.69 -0.6
236,853 + 14569 mRNA_6201 0.69 -0.3
236,858 - 14569 mRNA_6201 0.70 0.0
236,865 - 14569 mRNA_6201 0.71 0.4
236,866 + 14569 mRNA_6201 0.72 0.4
236,875 + 14569 mRNA_6201 0.73 0.5
236,886 + 14569 mRNA_6201 0.75 0.1
237,000 + -0.5
237,017 + 0.5
237,024 - 1.1
237,026 + 0.8
237,026 - 0.0
237,031 + 1.0
237,303 - 0.5
237,581 - -1.5
237,602 - 1.5
237,873 + 14570 mRNA_6202 0.16 0.2
237,918 - 14570 mRNA_6202 0.18 0.0