Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6200

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6199: 14567 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 230911 to 232731 14567 mRNA_6200: 14568 - Hypothetical Protein, at 233137 to 235524 14568 mRNA_6201: 14569 - Hypothetical Protein, at 236476 to 237020 14569

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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232,202 - 14567 mRNA_6199 0.71 0.0
232,335 - 14567 mRNA_6199 0.78 -0.3
232,458 - 14567 mRNA_6199 0.85 2.2
232,469 - 14567 mRNA_6199 0.86 1.2
232,478 - 14567 mRNA_6199 0.86 0.4
232,509 - 14567 mRNA_6199 0.88 -0.1
232,514 - 14567 mRNA_6199 0.88 -0.4
232,597 - -1.4
232,618 + -0.1
232,626 - 1.2
232,637 + 0.9
232,643 - -0.1
232,657 + 0.0
232,783 - 2.7
232,815 + 0.9
232,821 + 1.4
232,953 - 0.7
233,105 - 1.4
233,829 - 14568 mRNA_6200 0.29 0.8
234,007 - 14568 mRNA_6200 0.36 -0.3
234,147 - 14568 mRNA_6200 0.42 0.1
234,147 + 14568 mRNA_6200 0.42 -0.9
234,860 + 14568 mRNA_6200 0.72 0.4
235,142 + 14568 mRNA_6200 0.84 -0.0
235,142 + 14568 mRNA_6200 0.84 0.4
235,436 - -0.6
235,461 - 1.0
235,559 + 0.4
235,572 - -0.3
235,575 - 0.6
235,575 + -0.1
235,579 - 0.4
235,608 + 0.1
235,615 - -0.5
235,631 - 0.3
235,633 - 0.4
235,634 + 2.4
235,701 + 2.0
235,775 + 2.0
236,071 - 0.0
236,081 - -0.7
236,229 + -0.6
236,234 - 1.5
236,311 - -0.7
236,359 + 1.5
236,371 - -1.2
236,377 + -0.3
236,507 - -0.7