Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6191

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6190: 14558 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 215040 to 217246 14558 mRNA_6191: 14559 - K01485 codA cytosine deaminase, at 218019 to 218832 14559 mRNA_6192: 14560 - Hypothetical Protein, at 219520 to 220950 14560

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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217,049 - 0.1
217,056 + 0.3
217,057 + -0.0
217,058 - 2.2
217,065 - -0.2
217,071 + 0.3
217,209 + 0.5
217,210 + 0.2
217,220 + -0.3
217,236 - 0.8
217,345 - 1.0
217,351 - 1.3
217,352 + 0.1
217,352 - 0.3
217,363 - 0.2
217,363 - 0.0
217,365 - 0.0
217,366 + 0.9
217,367 - 0.4
217,369 - 2.6
217,370 + 0.2
217,372 - 0.2
217,372 + 1.2
217,372 - -1.1
217,383 + -0.1
217,385 + -0.0
217,390 - 0.3
217,391 + 0.2
217,392 + -0.7
217,392 + 0.1
217,396 - 0.5
217,398 - 0.3
217,408 + -0.3
217,429 - -0.3
217,441 + -1.0
217,460 - 1.3
217,465 + -0.3
217,488 + 3.0
217,549 - 0.1
217,572 + -0.8
217,575 - 0.7
217,594 - -0.1
217,605 + 2.4
217,620 + -0.6
217,623 - 2.2
217,625 - 1.9
217,626 + 0.3
217,628 - 1.1
217,630 - 0.9
217,631 + -2.5
217,633 + 1.6
217,634 + 1.3
217,638 - 0.5
217,639 - 1.2
217,646 - 0.8
217,653 + 1.9
217,655 + -1.8
217,662 - 0.4
217,677 - -1.5
217,694 - 1.9
217,695 + -2.2
217,696 + 0.2
217,706 + -0.4
217,707 + 0.6
217,721 + 0.6
217,739 + 0.3
217,750 + -0.4
217,772 + -0.3
217,777 + -0.7
217,778 + 2.6
217,787 + -0.2
217,801 + 1.7
217,801 + 2.3
217,808 + 0.8
217,818 + 1.8
217,822 - 0.5
217,823 + -0.8
217,823 - 0.7
217,824 + 2.8
217,825 - 0.0
217,825 - 0.1
217,825 + 0.6
217,832 + 1.3
217,833 + 1.9
217,835 + 2.8
217,837 + 0.5
217,841 + 2.8
217,842 + 1.8
217,848 - -0.3
217,851 + -0.5
217,855 - 0.0
217,859 + 0.0
217,874 + -0.2
217,985 + -1.2
217,995 + -0.8
218,006 + -0.2
218,011 - 1.4
218,152 + 14559 mRNA_6191 0.16 0.4
218,164 + 14559 mRNA_6191 0.18 -0.6
218,268 - 14559 mRNA_6191 0.31 0.4
218,294 - 14559 mRNA_6191 0.34 -0.2
218,752 + 0.9
219,011 - 0.9
219,135 + 0.2
219,142 - 3.5
219,151 + 0.7
219,156 + 0.8
219,157 - 0.3
219,161 - 1.7
219,161 - 0.9
219,175 - -0.2
219,179 + 0.9
219,188 + 2.4
219,210 - -0.5
219,216 + 2.0
219,228 + -1.2
219,229 + -0.6
219,232 + -1.0
219,288 + 0.8
219,290 + -0.9
219,320 - 0.1
219,328 + 1.4
219,486 + 0.3
219,617 - -1.1
219,654 - 0.0
219,664 + 14560 mRNA_6192 0.10 0.6
219,775 + 14560 mRNA_6192 0.18 -2.9
219,795 - 14560 mRNA_6192 0.19 0.9