Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6168

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6167: 14535 - K11672 ACTR5, ARP5, INO80M actin-related protein 5, at 157768 to 160667 14535 mRNA_6168: 14536 - SUPERFAMILY--SSF52047, at 160980 to 164129 14536 mRNA_6169: 14537 - K20304 TRAPPC6, TRS33 trafficking protein particle complex subunit 6, at 164256 to 165475 14537

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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160,437 + -1.4
160,995 - 1.3
161,809 - 14536 mRNA_6168 0.26 1.1
161,854 - 14536 mRNA_6168 0.28 -0.2
162,291 - 14536 mRNA_6168 0.42 0.8
162,435 - 14536 mRNA_6168 0.46 0.2
162,584 - 14536 mRNA_6168 0.51 0.9
162,621 - 14536 mRNA_6168 0.52 1.2
162,753 + 14536 mRNA_6168 0.56 -0.7
163,017 + 14536 mRNA_6168 0.65 -0.4
163,324 + 14536 mRNA_6168 0.74 -0.5
163,593 - 14536 mRNA_6168 0.83 0.2
163,620 - 14536 mRNA_6168 0.84 1.8
163,622 + 14536 mRNA_6168 0.84 -0.5
163,742 - 14536 mRNA_6168 0.88 -1.1
163,888 + 1.2
163,907 - 0.7
164,013 + -0.4
164,030 - -1.9
164,176 + 1.8
164,182 - -0.5
164,193 + -0.7
164,213 + 2.6