Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6150

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6149: 14517 - Hypothetical Protein, at 122739 to 123475 14517 mRNA_6150: 14518 - KOG3399 Predicted Yippee-type zinc-binding protein, at 123821 to 124477 14518 mRNA_6151: 14519 - Hypothetical Protein, at 124674 to 126819 14519

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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122,854 + 14517 mRNA_6149 0.16 -0.3
122,955 - 14517 mRNA_6149 0.29 0.2
123,260 - 14517 mRNA_6149 0.71 -0.5
123,266 + 14517 mRNA_6149 0.72 0.2
123,402 + 2.9
123,533 - 2.1
123,534 + 0.3
123,676 + -1.3
123,731 + -0.3
123,850 + 0.6
124,038 + 14518 mRNA_6150 0.33 -0.2
124,102 + 14518 mRNA_6150 0.43 0.2
124,299 + 14518 mRNA_6150 0.73 0.7
124,382 - 14518 mRNA_6150 0.85 -0.0
124,392 - 14518 mRNA_6150 0.87 1.7
124,531 - -0.2
124,573 + -0.3
124,676 - 1.9
124,700 + 0.8
124,707 - 0.1
125,151 - 14519 mRNA_6151 0.22 0.8
125,318 + 14519 mRNA_6151 0.30 1.3