Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6144

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6144: 14512 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 113146 to 115077 14512 mRNA_6145: 14513 - HMMPfam-Protein of unknown function (DUF2456)-PF10445, at 115513 to 116915 14513

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
112,187 - 0.4
112,188 + -0.4
112,192 - -0.8
112,244 + 1.5
112,283 - 0.6
112,368 - 1.8
112,378 - -1.6
112,382 - 0.8
112,383 - 2.5
112,388 + 0.5
112,477 - 0.5
112,479 + -0.3
112,496 - 0.1
112,510 + 1.1
112,512 - 0.2
112,519 + 0.0
112,547 + 0.4
112,549 - 1.6
112,561 - 3.3
112,565 + -0.2
112,568 + 0.9
112,571 + 0.5
112,601 + 0.4
112,622 - -0.5
112,632 + 0.2
112,736 + -0.2
112,741 - -0.2
112,741 - 1.0
112,741 - 0.2
112,748 + -0.9
112,759 + 0.1
112,760 + 1.1
112,774 + 0.2
112,918 - 1.3
113,048 - 2.9
113,085 - -0.9
113,085 - -0.1
113,678 + 14512 mRNA_6144 0.28 -0.4
113,757 - 14512 mRNA_6144 0.32 2.2
113,945 - 14512 mRNA_6144 0.41 1.4
114,101 - 14512 mRNA_6144 0.49 0.3
114,958 + 1.8
115,135 - 1.0
115,298 + 0.4
115,400 + 0.7
115,794 - 14513 mRNA_6145 0.20 0.9
115,922 + 14513 mRNA_6145 0.29 -0.2
116,022 - 14513 mRNA_6145 0.36 1.8