Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6141

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6141: 14509 - HMMPfam-GGL domain-PF00631,SUPERFAMILY--SSF48670, at 106663 to 106926 14509 mRNA_6142: 14510 - Hypothetical Protein, at 107739 to 108173 14510

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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105,769 - 1.5
105,791 - 1.1
105,801 - 0.4
105,818 + 0.4
105,823 + 1.6
105,825 - -0.4
105,829 - -0.4
105,830 + -1.3
105,839 - -0.7
105,841 - 1.1
105,842 + -0.9
105,850 - 0.1
105,851 + -1.1
105,851 + 0.4
105,858 + 0.2
105,867 - -2.3
105,871 - -1.1
105,882 - -0.7
105,996 + 0.7
106,003 + 0.2
106,080 - 0.4
106,316 - 1.4
106,576 + 1.6
106,722 - 14509 mRNA_6141 0.22 -0.7
106,999 - -0.1
107,009 + 1.9
107,019 + -2.2
107,025 - 0.3
107,029 - 1.5
107,034 - 0.1
107,155 + 1.6
107,166 + -0.6
107,170 + 0.5
107,171 + 0.1
107,175 - -1.0
107,296 - 0.3
107,308 + 0.6
107,310 + 1.8
107,310 - 0.3
107,320 - 2.5
107,332 - 1.5
107,333 - 0.4
107,346 - 0.1
107,359 - -0.5
107,363 + 1.0
107,371 - 0.4
107,372 - -0.5
107,375 - 0.1
107,376 + 2.3
107,390 + 2.3
107,395 + -0.1
107,488 - -1.1
107,507 + 1.6
107,523 - -0.2
107,535 - -0.3
107,535 - 0.2
107,536 + 1.1
107,542 + -2.6
107,559 + 0.6
107,574 - -0.1
107,674 - 2.5
107,691 - -0.2
107,819 - 14510 mRNA_6142 0.18 1.7