Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6123

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6122: 14490 - SUPERFAMILY--SSF53098, at 54138 to 56327 14490 mRNA_6123: 14491 - BLAST DNA polymerase [Rhizoctonia solani], at 56792 to 57276 14491 mRNA_6124: 14492 - Hypothetical Protein, at 57448 to 58239 14492

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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55,888 - 14490 mRNA_6122 0.80 3.6
55,891 - 14490 mRNA_6122 0.80 1.0
55,928 + 14490 mRNA_6122 0.82 -0.1
56,387 + 0.7
56,646 + 0.7
56,662 + 0.1
56,666 + -0.5
56,775 - -0.4
56,781 + 0.6
56,864 + 14491 mRNA_6123 0.15 -0.8
57,075 - 14491 mRNA_6123 0.58 2.4
57,218 - 14491 mRNA_6123 0.88 0.9
57,397 - 0.3
57,401 + -2.1
57,555 + 14492 mRNA_6124 0.14 1.5
57,645 - 14492 mRNA_6124 0.25 1.9
57,677 + 14492 mRNA_6124 0.29 -0.7
57,819 - 14492 mRNA_6124 0.47 -0.9
57,825 + 14492 mRNA_6124 0.48 -0.7
57,827 - 14492 mRNA_6124 0.48 2.5
57,834 + 14492 mRNA_6124 0.49 2.3
57,834 + 14492 mRNA_6124 0.49 0.9
57,943 - 14492 mRNA_6124 0.62 0.6
57,948 - 14492 mRNA_6124 0.63 -0.1
57,975 + 14492 mRNA_6124 0.67 0.8
57,984 - 14492 mRNA_6124 0.68 -0.2
58,132 - 14492 mRNA_6124 0.86 0.3
58,139 + 14492 mRNA_6124 0.87 -0.4
58,151 - 14492 mRNA_6124 0.89 1.5
58,159 - 14492 mRNA_6124 0.90 2.8
58,191 + -2.1