Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6117

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6116: 14484 - Hypothetical Protein, at 27856 to 28790 14484 mRNA_6117: 14485 - BLAST expressed protein [Schizophyllum commune H4-8], at 29394 to 30967 14485 mRNA_6118: 14486 - K03164 TOP2 DNA topoisomerase II, at 31417 to 38158 14486

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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28,481 + 14484 mRNA_6116 0.67 2.2
28,671 - 14484 mRNA_6116 0.87 0.4
28,724 + 0.1
28,965 + -0.5
29,023 - -1.2
29,091 + -0.2
29,123 - -0.7
29,142 + 0.3
29,394 - 1.0
29,527 - 4.9
29,785 - 14485 mRNA_6117 0.25 2.4
29,935 - 14485 mRNA_6117 0.34 -0.1
30,340 - 14485 mRNA_6117 0.60 -0.9
30,935 + -0.5
31,090 + -0.2
31,217 - 0.2
31,353 + 2.1
31,360 - 0.3
31,371 + 0.8
31,373 + 1.6
31,389 - -0.0
31,502 - -0.4