Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6116

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6115: 14483 - Hypothetical Protein, at 26459 to 27455 14483 mRNA_6116: 14484 - Hypothetical Protein, at 27856 to 28790 14484 mRNA_6117: 14485 - BLAST expressed protein [Schizophyllum commune H4-8], at 29394 to 30967 14485

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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26,865 + 14483 mRNA_6115 0.41 1.6
26,871 - 14483 mRNA_6115 0.41 1.0
26,872 + 14483 mRNA_6115 0.41 0.8
26,877 - 14483 mRNA_6115 0.42 0.3
26,898 + 14483 mRNA_6115 0.44 0.9
26,996 - 14483 mRNA_6115 0.54 1.6
27,001 - 14483 mRNA_6115 0.54 0.3
27,004 - 14483 mRNA_6115 0.55 0.0
27,009 - 14483 mRNA_6115 0.55 0.1
27,058 - 14483 mRNA_6115 0.60 0.4
27,134 - 14483 mRNA_6115 0.68 1.0
27,139 - 14483 mRNA_6115 0.68 -0.6
27,163 - 14483 mRNA_6115 0.71 0.8
27,219 + 14483 mRNA_6115 0.76 0.5
27,341 - 14483 mRNA_6115 0.88 -0.8
27,346 + 14483 mRNA_6115 0.89 1.4
27,377 + -0.3
27,381 + -1.2
27,511 + 1.0
27,735 - -1.1
27,934 - -0.2
28,046 - 14484 mRNA_6116 0.20 0.6
28,058 - 14484 mRNA_6116 0.22 -1.4
28,064 + 14484 mRNA_6116 0.22 0.6
28,217 + 14484 mRNA_6116 0.39 0.4
28,231 + 14484 mRNA_6116 0.40 0.0
28,250 + 14484 mRNA_6116 0.42 0.1
28,481 + 14484 mRNA_6116 0.67 2.2
28,671 - 14484 mRNA_6116 0.87 0.4
28,724 + 0.1
28,965 + -0.5
29,023 - -1.2
29,091 + -0.2
29,123 - -0.7
29,142 + 0.3
29,394 - 1.0
29,527 - 4.9
29,785 - 14485 mRNA_6117 0.25 2.4