Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6111

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6110: 14478 - Hypothetical Protein, at 15067 to 15769 14478 mRNA_6111: 14479 - Hypothetical Protein, at 16061 to 17629 14479 mRNA_6112: 14480 - K01785 galM, GALM aldose 1-epimerase, at 17714 to 19844 14480

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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15,116 - -0.4
15,117 + 1.1
15,118 + 0.2
15,130 + -1.7
15,245 - 14478 mRNA_6110 0.25 0.2
15,256 + 14478 mRNA_6110 0.27 -0.0
15,281 - 14478 mRNA_6110 0.30 0.2
15,308 + 14478 mRNA_6110 0.34 -0.2
15,311 + 14478 mRNA_6110 0.35 -1.5
15,544 - 14478 mRNA_6110 0.68 1.3
15,693 - 14478 mRNA_6110 0.89 1.5
15,705 + 0.8
15,765 - 2.4
15,862 + 1.6
16,319 + 14479 mRNA_6111 0.16 0.3
16,533 + 14479 mRNA_6111 0.30 1.9
16,535 - 14479 mRNA_6111 0.30 2.7
16,665 + 14479 mRNA_6111 0.38 1.4
16,681 + 14479 mRNA_6111 0.40 0.1
16,681 + 14479 mRNA_6111 0.40 0.7
16,689 + 14479 mRNA_6111 0.40 2.6
16,719 + 14479 mRNA_6111 0.42 1.1
16,817 + 14479 mRNA_6111 0.48 1.6
16,983 - 14479 mRNA_6111 0.59 2.2
17,034 + 14479 mRNA_6111 0.62 -1.0
17,141 + 14479 mRNA_6111 0.69 0.9
17,177 - 14479 mRNA_6111 0.71 -0.3
17,181 + 14479 mRNA_6111 0.71 -1.2
17,236 + 14479 mRNA_6111 0.75 -0.4
17,259 + 14479 mRNA_6111 0.76 0.1
17,567 + 0.7
17,865 - -0.4
18,020 - 14480 mRNA_6112 0.14 -0.1
18,077 + 14480 mRNA_6112 0.17 -1.0
18,276 + 14480 mRNA_6112 0.26 1.6
18,462 + 14480 mRNA_6112 0.35 -0.2
18,464 - 14480 mRNA_6112 0.35 -0.0
18,586 + 14480 mRNA_6112 0.41 0.6
18,589 - 14480 mRNA_6112 0.41 1.8
18,596 + 14480 mRNA_6112 0.41 0.6
18,598 - 14480 mRNA_6112 0.41 0.5