Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6110

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6109: 14477 - KOG1477 SPRY domain-containing proteins, at 12198 to 14626 14477 mRNA_6110: 14478 - Hypothetical Protein, at 15067 to 15769 14478 mRNA_6111: 14479 - Hypothetical Protein, at 16061 to 17629 14479

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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14,377 + 14477 mRNA_6109 0.90 -0.0
14,420 + 2.2
14,518 - 1.1
14,520 + 2.5
14,652 + -0.4
14,654 - 2.3
14,676 + 0.2
14,687 + -0.3
14,782 - 1.8
14,806 - 0.4
14,921 + 0.4
14,942 - 0.9
14,949 + 1.6
14,979 - -0.5
14,986 - -0.1
15,116 - -0.4
15,117 + 1.1
15,118 + 0.2
15,130 + -1.7
15,245 - 14478 mRNA_6110 0.25 0.2
15,256 + 14478 mRNA_6110 0.27 -0.0
15,281 - 14478 mRNA_6110 0.30 0.2
15,308 + 14478 mRNA_6110 0.34 -0.2
15,311 + 14478 mRNA_6110 0.35 -1.5
15,544 - 14478 mRNA_6110 0.68 1.3
15,693 - 14478 mRNA_6110 0.89 1.5
15,705 + 0.8
15,765 - 2.4
15,862 + 1.6
16,319 + 14479 mRNA_6111 0.16 0.3
16,533 + 14479 mRNA_6111 0.30 1.9
16,535 - 14479 mRNA_6111 0.30 2.7
16,665 + 14479 mRNA_6111 0.38 1.4
16,681 + 14479 mRNA_6111 0.40 0.1
16,681 + 14479 mRNA_6111 0.40 0.7
16,689 + 14479 mRNA_6111 0.40 2.6
16,719 + 14479 mRNA_6111 0.42 1.1