Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6104

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6103: 14471 - K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein), at 1663795 to 1664238 14471 mRNA_6104: 14472 - Hypothetical Protein, at 1664602 to 1665579 14472 mRNA_6105: 14473 - Hypothetical Protein, at 1665717 to 1666372 14473

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,663,602 + -0.3
1,663,645 + 0.5
1,663,723 + -0.8
1,663,737 - -0.7
1,663,738 + -0.0
1,663,739 + 1.2
1,663,913 - 14471 mRNA_6103 0.27 0.1
1,663,916 + 14471 mRNA_6103 0.27 0.1
1,664,029 - 14471 mRNA_6103 0.53 0.4
1,664,468 - 0.8
1,664,887 - 14472 mRNA_6104 0.29 -1.6
1,664,928 - 14472 mRNA_6104 0.33 1.6
1,665,276 - 14472 mRNA_6104 0.69 1.7
1,665,444 - 14472 mRNA_6104 0.86 1.6
1,665,457 - 14472 mRNA_6104 0.87 0.8
1,665,469 - 14472 mRNA_6104 0.89 -0.5
1,665,474 - 14472 mRNA_6104 0.89 -0.1
1,665,545 + 1.9
1,665,610 + 2.7
1,665,681 - -1.4
1,665,749 - 0.3
1,665,751 + 0.1
1,665,757 + 0.4
1,665,777 + 1.7
1,665,789 - 14473 mRNA_6105 0.11 -1.4
1,665,834 - 14473 mRNA_6105 0.18 2.4
1,665,847 + 14473 mRNA_6105 0.20 -1.3
1,665,892 + 14473 mRNA_6105 0.27 -1.5
1,665,895 + 14473 mRNA_6105 0.27 0.4
1,665,900 + 14473 mRNA_6105 0.28 1.6
1,665,900 + 14473 mRNA_6105 0.28 1.2
1,665,903 - 14473 mRNA_6105 0.28 1.7
1,665,914 - 14473 mRNA_6105 0.30 -0.0
1,665,915 - 14473 mRNA_6105 0.30 0.3
1,665,920 + 14473 mRNA_6105 0.31 0.5
1,665,922 + 14473 mRNA_6105 0.31 2.6
1,665,941 - 14473 mRNA_6105 0.34 1.5
1,665,948 + 14473 mRNA_6105 0.35 0.0
1,666,004 - 14473 mRNA_6105 0.44 0.8
1,666,031 + 14473 mRNA_6105 0.48 -0.9
1,666,069 + 14473 mRNA_6105 0.54 2.2
1,666,069 - 14473 mRNA_6105 0.54 -1.1
1,666,072 + 14473 mRNA_6105 0.54 0.4
1,666,079 - 14473 mRNA_6105 0.55 0.2
1,666,088 + 14473 mRNA_6105 0.57 -0.8
1,666,092 + 14473 mRNA_6105 0.57 -0.0
1,666,099 + 14473 mRNA_6105 0.58 -0.6
1,666,109 + 14473 mRNA_6105 0.60 2.8
1,666,118 - 14473 mRNA_6105 0.61 0.5
1,666,211 + 14473 mRNA_6105 0.75 0.0
1,666,212 + 14473 mRNA_6105 0.75 0.3
1,666,214 - 14473 mRNA_6105 0.76 -0.2
1,666,214 - 14473 mRNA_6105 0.76 0.0
1,666,214 - 14473 mRNA_6105 0.76 1.1
1,666,221 + 14473 mRNA_6105 0.77 -0.5
1,666,229 - 14473 mRNA_6105 0.78 1.4
1,666,230 - 14473 mRNA_6105 0.78 -0.4
1,666,236 - 14473 mRNA_6105 0.79 0.8
1,666,237 - 14473 mRNA_6105 0.79 -0.0
1,666,254 + 14473 mRNA_6105 0.82 -1.1
1,666,271 - 14473 mRNA_6105 0.84 0.4
1,666,286 + 14473 mRNA_6105 0.87 -1.9
1,666,319 - -1.3
1,666,350 - -0.7
1,666,362 - -0.4
1,666,370 + -0.3
1,666,378 - 0.9
1,666,387 - -0.4
1,666,387 + 1.7
1,666,390 - 0.7
1,666,394 + -2.3
1,666,407 - 0.9
1,666,408 - 0.4
1,666,415 - -0.4
1,666,422 + 1.6
1,666,474 - 0.1
1,666,479 - -1.9
1,666,491 + -0.9
1,666,493 - 0.1
1,666,493 - -0.3
1,666,496 - 0.0
1,666,499 - -0.4
1,666,506 + 1.1
1,666,507 + 0.8
1,666,515 - 0.8
1,666,521 + -3.1
1,666,533 + 1.6
1,666,538 + 0.4
1,666,540 - 0.4
1,666,549 - 0.3
1,666,549 - 0.4
1,666,552 - 2.3
1,666,557 + -0.4
1,666,561 - -0.3
1,666,561 - -0.9
1,666,562 - -0.5
1,666,571 + -0.9
1,666,575 - -0.5
1,666,576 + 1.0