Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6064

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6063: 14431 - KOG0519 Sensory transduction histidine kinase, at 1552010 to 1556333 14431 mRNA_6064: 14432 - Hypothetical Protein, at 1556373 to 1558599 14432

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,555,392 - 14431 mRNA_6063 0.78 0.8
1,555,395 - 14431 mRNA_6063 0.78 0.1
1,555,395 - 14431 mRNA_6063 0.78 2.8
1,555,399 - 14431 mRNA_6063 0.78 -0.9
1,555,403 - 14431 mRNA_6063 0.78 3.5
1,555,425 - 14431 mRNA_6063 0.79 -0.2
1,555,490 - 14431 mRNA_6063 0.80 0.5
1,555,547 + 14431 mRNA_6063 0.82 -0.6
1,555,592 - 14431 mRNA_6063 0.83 -0.1
1,555,695 + 14431 mRNA_6063 0.85 2.0
1,555,904 - -0.4
1,555,990 + 2.3
1,556,168 - 0.6
1,556,260 + 0.6
1,556,305 - -0.1
1,556,305 + 1.5
1,556,309 - 0.4
1,556,402 + 1.4
1,556,408 - -1.5
1,556,434 + 0.7
1,556,440 - -0.6
1,556,442 - -0.3
1,556,448 + 1.3
1,556,449 - 0.8
1,556,450 - 1.6
1,556,456 + 1.1
1,556,456 - 0.0
1,556,477 - 1.5
1,556,517 + 0.1
1,556,604 - 14432 mRNA_6064 0.10 0.3
1,556,610 + 14432 mRNA_6064 0.11 -0.4
1,556,649 - 14432 mRNA_6064 0.12 1.5
1,556,654 - 14432 mRNA_6064 0.13 -0.6
1,556,655 + 14432 mRNA_6064 0.13 -0.4
1,556,703 - 14432 mRNA_6064 0.15 2.3
1,556,735 - 14432 mRNA_6064 0.16 -0.2
1,556,757 - 14432 mRNA_6064 0.17 0.5
1,556,762 - 14432 mRNA_6064 0.17 0.3
1,556,793 - 14432 mRNA_6064 0.19 0.3
1,557,311 + 14432 mRNA_6064 0.42 0.3
1,557,322 - 14432 mRNA_6064 0.43 -1.7
1,557,323 + 14432 mRNA_6064 0.43 1.1
1,557,435 + 14432 mRNA_6064 0.48 0.1
1,557,492 - 14432 mRNA_6064 0.50 -0.5
1,557,588 - 14432 mRNA_6064 0.55 -0.5
1,557,605 - 14432 mRNA_6064 0.55 -0.2
1,557,666 - 14432 mRNA_6064 0.58 -0.9
1,557,675 + 14432 mRNA_6064 0.58 -0.8
1,557,750 - 14432 mRNA_6064 0.62 0.1
1,557,866 - 14432 mRNA_6064 0.67 0.2
1,557,884 - 14432 mRNA_6064 0.68 1.9
1,557,949 - 14432 mRNA_6064 0.71 0.3
1,558,030 - 14432 mRNA_6064 0.74 -0.9
1,558,181 - 14432 mRNA_6064 0.81 0.1
1,558,207 + 14432 mRNA_6064 0.82 0.4
1,558,344 - 14432 mRNA_6064 0.89 -1.0
1,558,351 - 14432 mRNA_6064 0.89 2.1
1,558,657 + 0.5
1,558,899 - 0.4
1,558,926 - -0.5
1,558,944 + 1.3
1,559,049 - 0.0
1,559,291 - 0.5
1,559,337 + 0.6
1,559,362 - 1.3
1,559,486 - 1.1
1,559,509 - 2.7
1,559,555 - 0.1