Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6037

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6036: 14404 - Hypothetical Protein, at 1494259 to 1495316 14404 mRNA_6037: 14405 - SUPERFAMILY--SSF52047, at 1495586 to 1496740 14405 mRNA_6038: 14406 - Hypothetical Protein, at 1497291 to 1498658 14406

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,494,688 + 14404 mRNA_6036 0.41 1.5
1,494,888 - 14404 mRNA_6036 0.59 0.8
1,494,935 + 14404 mRNA_6036 0.64 0.4
1,494,938 - 14404 mRNA_6036 0.64 0.1
1,494,989 + 14404 mRNA_6036 0.69 0.9
1,495,176 + 14404 mRNA_6036 0.87 2.4
1,495,245 + 1.6
1,495,380 + -0.2
1,495,555 + 2.1
1,495,626 - 0.1
1,495,666 + -0.3
1,495,676 + 0.1
1,495,680 + -0.1
1,495,693 + 0.2
1,495,751 - 14405 mRNA_6037 0.14 -2.9
1,495,811 - 14405 mRNA_6037 0.19 -0.1
1,496,275 + 14405 mRNA_6037 0.60 -2.3
1,496,322 - 14405 mRNA_6037 0.64 1.1
1,496,433 - 14405 mRNA_6037 0.73 -1.8
1,496,533 + 14405 mRNA_6037 0.82 2.2
1,496,594 - 14405 mRNA_6037 0.87 -0.3
1,496,667 - 0.3
1,497,179 + -0.1
1,497,283 - -0.4
1,497,314 + -0.6
1,497,331 - 1.9
1,497,457 - 14406 mRNA_6038 0.12 0.9
1,497,460 - 14406 mRNA_6038 0.12 -0.4
1,497,703 - 14406 mRNA_6038 0.30 -2.1