Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5990

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5989: 14357 - SUPERFAMILY--SSF52047, at 1392588 to 1397872 14357 mRNA_5990: 14358 - Hypothetical Protein, at 1398213 to 1398410 14358 mRNA_5991: 14359 - Hypothetical Protein, at 1398827 to 1400392 14359

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,397,224 - 14357 mRNA_5989 0.88 -1.4
1,397,244 - 14357 mRNA_5989 0.88 2.8
1,397,367 + -0.5
1,397,374 + 1.0
1,397,492 + 0.1
1,397,658 + -0.1
1,397,672 - 0.4
1,397,679 + 0.1
1,397,724 - -0.2
1,397,823 - 0.2
1,397,826 + 0.2
1,397,982 - -0.5
1,398,070 + -1.2
1,398,253 - 14358 mRNA_5990 0.20 -0.7
1,398,382 + 14358 mRNA_5990 0.85 2.2
1,398,406 + -1.0
1,398,520 - -0.4
1,398,569 + 2.7
1,398,571 - 0.6
1,398,572 + 2.8
1,398,578 - 0.2
1,398,893 + 0.1
1,398,953 - 0.8
1,398,954 + 0.3
1,398,992 - 14359 mRNA_5991 0.11 -0.6