Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5977

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5976: 14344 - SUPERFAMILY--SSF52047, at 1363510 to 1364859 14344 mRNA_5977: 14345 - HMMPfam-F-box-like-PF12937, at 1365252 to 1367121 14345 mRNA_5978: 14346 - Hypothetical Protein, at 1367846 to 1369331 14346

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,364,579 + 14344 mRNA_5976 0.79 -1.1
1,364,697 - 14344 mRNA_5976 0.88 2.9
1,364,897 - -0.3
1,365,020 + -1.3
1,365,700 + 14345 mRNA_5977 0.24 0.7
1,365,893 - 14345 mRNA_5977 0.34 0.2
1,366,354 - 14345 mRNA_5977 0.59 0.5
1,366,377 - 14345 mRNA_5977 0.60 1.8
1,366,490 - 14345 mRNA_5977 0.66 -0.3
1,366,684 + 14345 mRNA_5977 0.77 -0.7
1,366,735 - 14345 mRNA_5977 0.79 -1.8
1,366,892 - 14345 mRNA_5977 0.88 1.1
1,366,896 - 14345 mRNA_5977 0.88 0.4
1,367,055 - 0.6
1,367,262 + 2.8
1,367,345 - 1.1
1,367,347 - 1.4
1,367,348 - 0.0
1,367,356 + -1.2
1,367,358 - 1.1
1,367,374 + 1.9
1,367,374 + 1.8
1,367,374 + -0.6
1,367,374 - -0.7
1,367,448 + 1.8
1,368,093 + 14346 mRNA_5978 0.17 1.5