Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5969

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5968: 14336 - Hypothetical Protein, at 1349496 to 1350670 14336 mRNA_5969: 14337 - Hypothetical Protein, at 1350863 to 1351981 14337 mRNA_5970: 14338 - Hypothetical Protein, at 1352279 to 1353458 14338

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,349,875 + 14336 mRNA_5968 0.32 1.5
1,349,908 + 14336 mRNA_5968 0.35 1.3
1,350,018 - 14336 mRNA_5968 0.44 -0.4
1,350,038 + 14336 mRNA_5968 0.46 -0.0
1,350,202 - 14336 mRNA_5968 0.60 -0.2
1,350,290 + 14336 mRNA_5968 0.68 -0.1
1,350,323 - 14336 mRNA_5968 0.70 0.6
1,350,351 - 14336 mRNA_5968 0.73 -0.3
1,350,474 + 14336 mRNA_5968 0.83 1.4
1,350,669 - 0.5
1,350,749 + -0.7
1,350,784 + -0.1
1,350,887 - 3.3
1,350,911 - -0.9
1,350,931 + 1.0
1,351,053 - 14337 mRNA_5969 0.17 0.5
1,351,143 + 14337 mRNA_5969 0.25 -0.0
1,351,362 + 14337 mRNA_5969 0.45 -1.0
1,351,365 + 14337 mRNA_5969 0.45 3.5
1,351,586 - 14337 mRNA_5969 0.65 2.6
1,351,593 - 14337 mRNA_5969 0.65 -0.6
1,351,620 + 14337 mRNA_5969 0.68 4.1
1,351,639 + 14337 mRNA_5969 0.69 -2.8
1,351,763 + 14337 mRNA_5969 0.80 -0.1
1,351,781 - 14337 mRNA_5969 0.82 0.1
1,351,790 + 14337 mRNA_5969 0.83 0.6
1,351,930 - -2.1
1,352,063 - 0.9
1,352,074 + 3.3
1,352,081 + 0.5
1,352,110 + -0.3
1,352,202 - -0.1
1,352,215 + -0.6
1,352,221 + 1.1
1,352,263 + 1.0
1,352,267 + -0.1
1,352,376 + 0.1
1,352,475 + 14338 mRNA_5970 0.17 0.2
1,352,520 + 14338 mRNA_5970 0.20 -0.1
1,352,657 - 14338 mRNA_5970 0.32 -1.1
1,352,660 + 14338 mRNA_5970 0.32 -0.6
1,352,682 - 14338 mRNA_5970 0.34 -1.6
1,352,685 + 14338 mRNA_5970 0.34 1.2
1,352,813 + 14338 mRNA_5970 0.45 2.1
1,352,814 + 14338 mRNA_5970 0.45 -0.4
1,352,822 + 14338 mRNA_5970 0.46 1.0
1,352,917 + 14338 mRNA_5970 0.54 0.8
1,352,961 + 14338 mRNA_5970 0.58 1.0
1,352,977 - 14338 mRNA_5970 0.59 1.0