Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5943

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5942: 14310 - HMMPfam-BUD22-PF09073, at 1290149 to 1292064 14310 mRNA_5943: 14311 - Hypothetical Protein, at 1292366 to 1293493 14311 mRNA_5944: 14312 - Hypothetical Protein, at 1293681 to 1295115 14312

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,292,240 - 0.0
1,292,391 + 2.6
1,292,399 - -1.8
1,292,409 + 0.4
1,292,417 + 0.2
1,292,532 - 14311 mRNA_5943 0.15 1.4
1,292,973 - 14311 mRNA_5943 0.54 -0.0
1,293,126 + 14311 mRNA_5943 0.67 0.3
1,293,165 + 14311 mRNA_5943 0.71 0.0
1,293,277 + 14311 mRNA_5943 0.81 0.4
1,293,404 - 0.1
1,293,408 + 0.5
1,293,411 - 1.9
1,293,424 - -2.3
1,293,425 + 0.4
1,293,427 - 2.3
1,293,456 + 0.1
1,293,722 + 0.9
1,293,736 - -0.3
1,294,013 - 14312 mRNA_5944 0.23 0.0
1,294,464 - 14312 mRNA_5944 0.55 -0.3
1,294,483 - 14312 mRNA_5944 0.56 1.1