Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5898

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5898: 14266 - Hypothetical Protein, at 1194829 to 1196243 14266 mRNA_5899: 14267 - K00038 E1.1.1.53 3alpha(or 20beta)-hydroxysteroid dehydrogenase, at 1196510 to 1197611 14267

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,193,859 - -2.2
1,193,860 - 1.5
1,193,887 + 2.8
1,193,908 + 1.2
1,193,920 - 1.8
1,193,933 + -2.4
1,194,070 - -0.2
1,194,071 + -0.6
1,194,079 + -0.6
1,194,092 - 1.5
1,194,248 - 1.8
1,194,285 + -0.7
1,194,391 + 0.4
1,194,407 - 0.5
1,194,415 + 1.0
1,195,365 - 14266 mRNA_5898 0.38 0.5
1,195,738 + 14266 mRNA_5898 0.64 1.6
1,195,857 + 14266 mRNA_5898 0.73 -0.2
1,196,175 - -0.0
1,196,303 - 1.7
1,196,323 + -0.4
1,196,442 + 0.9
1,196,462 - 2.4
1,196,475 - -0.9
1,196,643 + 14267 mRNA_5899 0.12 0.2
1,196,643 - 14267 mRNA_5899 0.12 3.2
1,196,768 - 14267 mRNA_5899 0.23 0.7
1,196,829 - 14267 mRNA_5899 0.29 0.5
1,196,907 + 14267 mRNA_5899 0.36 1.0
1,196,933 + 14267 mRNA_5899 0.38 0.6
1,197,081 - 14267 mRNA_5899 0.52 -0.1