Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5897

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1191974 to 1192832 14264 mRNA_5897: 14265 - Interpro Mitochondrial import receptor subunit or translocase, at 1192937 to 1193713 14265

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,192,300 + 14264 mRNA_5896 0.38 -1.2
1,192,306 - 14264 mRNA_5896 0.39 -0.1
1,192,740 - 14264 mRNA_5896 0.89 0.1
1,192,867 + 0.0
1,192,871 - -0.7
1,192,881 + 1.4
1,192,898 - -0.3
1,192,898 + -0.1
1,192,900 - -0.0
1,192,909 - -1.1
1,192,923 + 1.0
1,193,168 - 14265 mRNA_5897 0.30 0.8
1,193,356 - 14265 mRNA_5897 0.54 0.2
1,193,588 - 14265 mRNA_5897 0.84 -0.9
1,193,800 - -0.3
1,193,859 - -2.2
1,193,860 - 1.5
1,193,887 + 2.8
1,193,908 + 1.2
1,193,920 - 1.8
1,193,933 + -2.4
1,194,070 - -0.2
1,194,071 + -0.6
1,194,079 + -0.6
1,194,092 - 1.5
1,194,248 - 1.8
1,194,285 + -0.7
1,194,391 + 0.4
1,194,407 - 0.5
1,194,415 + 1.0