Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5889

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5888: 14256 - K00688 PYG, glgP glycogen phosphorylase, at 1171973 to 1175579 14256 mRNA_5889: 14257 - K02977 RP-S27Ae, RPS27A small subunit ribosomal protein S27Ae, at 1176475 to 1177214 14257 mRNA_5890: 14258 - K01876 DARS, aspS aspartyl-tRNA synthetase, at 1177559 to 1180094 14258

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,175,864 - -0.8
1,175,877 - -0.2
1,175,884 - 1.2
1,175,890 + 0.7
1,175,898 + -0.9
1,175,920 + -0.7
1,175,982 + 0.3
1,176,051 - -0.2
1,176,192 - 0.3
1,176,219 + 0.1
1,176,340 + 1.2
1,176,974 + 14257 mRNA_5889 0.67 1.2
1,177,250 - -0.4
1,177,256 + -0.2
1,177,315 - 1.3
1,177,404 - -0.0