Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5885

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5884: 14252 - K13830 ARO1 pentafunctional AROM polypeptide, at 1160549 to 1165878 14252 mRNA_5885: 14253 - KOG1424 Predicted GTP-binding protein MMR1, at 1166047 to 1168638 14253 mRNA_5886: 14254 - Hypothetical Protein, at 1169494 to 1170027 14254

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,165,072 + 14252 mRNA_5884 0.85 0.7
1,165,935 - 0.3
1,166,076 - 1.3
1,166,097 + 0.2
1,166,115 + -0.0
1,166,380 + 14253 mRNA_5885 0.13 -1.1
1,167,091 + 14253 mRNA_5885 0.40 -0.0
1,167,781 - 14253 mRNA_5885 0.67 -2.3
1,168,407 - 0.2
1,168,541 - 0.5
1,168,660 + -0.1
1,169,210 - 0.8