Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5822

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5821: 14189 - SUPERFAMILY--SSF52047, at 1023617 to 1025042 14189 mRNA_5822: 14190 - SUPERFAMILY--SSF52047, at 1025817 to 1027407 14190 mRNA_5823: 14191 - SUPERFAMILY--SSF52047, at 1027877 to 1028999 14191

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,024,967 - 0.9
1,024,981 - -0.0
1,024,987 + 0.8
1,025,425 - 1.2
1,025,449 + -1.2
1,025,459 + -0.1
1,025,468 + 0.4
1,025,471 + 0.1
1,025,749 + 2.2
1,025,892 + -0.7
1,026,180 - 14190 mRNA_5822 0.23 0.3
1,026,189 + 14190 mRNA_5822 0.23 -0.2
1,026,807 + 14190 mRNA_5822 0.62 1.6
1,026,890 + 14190 mRNA_5822 0.67 -2.3
1,027,051 + 14190 mRNA_5822 0.78 -0.9
1,027,203 + 14190 mRNA_5822 0.87 0.3
1,027,301 - 1.3
1,027,347 + 1.9
1,027,476 + 1.5
1,027,492 + 0.4
1,027,612 - -0.4
1,027,615 - 0.1
1,027,665 - 0.9
1,027,789 - 0.2
1,028,066 - 14191 mRNA_5823 0.17 -0.7
1,028,097 + 14191 mRNA_5823 0.20 0.5
1,028,099 + 14191 mRNA_5823 0.20 -1.0
1,028,392 + 14191 mRNA_5823 0.46 0.1