Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5821

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5820: 14188 - K11763 RSC9 chromatin structure-remodeling complex subunit RSC9, at 1021013 to 1023514 14188 mRNA_5821: 14189 - SUPERFAMILY--SSF52047, at 1023617 to 1025042 14189 mRNA_5822: 14190 - SUPERFAMILY--SSF52047, at 1025817 to 1027407 14190

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,022,778 + 14188 mRNA_5820 0.71 -0.3
1,023,834 + 14189 mRNA_5821 0.15 -1.0
1,023,852 + 14189 mRNA_5821 0.16 -1.3
1,023,971 - 14189 mRNA_5821 0.25 -0.7
1,024,143 - 14189 mRNA_5821 0.37 1.4
1,024,270 - 14189 mRNA_5821 0.46 -1.3
1,024,278 - 14189 mRNA_5821 0.46 -0.9
1,024,757 - 14189 mRNA_5821 0.80 1.9
1,024,967 - 0.9
1,024,981 - -0.0
1,024,987 + 0.8
1,025,425 - 1.2
1,025,449 + -1.2
1,025,459 + -0.1
1,025,468 + 0.4
1,025,471 + 0.1
1,025,749 + 2.2
1,025,892 + -0.7