Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5782

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5781: 14149 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 928807 to 930630 14149 mRNA_5782: 14150 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 931244 to 933171 14150 mRNA_5783: 14151 - KOG4623 Uncharacterized conserved protein, at 933374 to 935462 14151

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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930,316 + 14149 mRNA_5781 0.83 1.4
930,548 - 2.0
930,713 - 1.7
930,834 + -0.1
930,893 - 0.6
931,019 - -1.5
931,039 - 0.6
931,047 + 0.4
931,047 + -0.3
931,049 + -0.9
931,628 - 14150 mRNA_5782 0.20 0.6
931,685 - 14150 mRNA_5782 0.23 0.7
931,919 + 14150 mRNA_5782 0.35 -1.0
932,194 - 14150 mRNA_5782 0.49 -0.1
932,205 - 14150 mRNA_5782 0.50 -0.6
932,209 - 14150 mRNA_5782 0.50 0.3
932,229 + 14150 mRNA_5782 0.51 -0.2
932,371 + 14150 mRNA_5782 0.58 1.3
932,375 - 14150 mRNA_5782 0.59 0.8
932,489 + 14150 mRNA_5782 0.65 -0.6
933,109 - 1.0
933,121 + 0.5
933,146 + 0.2
933,342 - 0.3
933,390 + 0.4
933,423 - 1.4
933,525 - -0.1
933,599 - 14151 mRNA_5783 0.11 0.9
933,953 - 14151 mRNA_5783 0.28 -0.7