Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5776

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5775: 14143 - Hypothetical Protein, at 918877 to 919776 14143 mRNA_5776: 14144 - HMMPfam-Phosphatidylinositol-specific phospholipase C, X domain-PF00388,ProSiteProfiles-Phosphatidylinositol-specific phospholipase X-box domain profile.-PS50007,SUPERFAMILY--SSF51695, at 920137 to 921765 14144 mRNA_5777: 14145 - Hypothetical Protein, at 921951 to 922623 14145

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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919,209 - 14143 mRNA_5775 0.37 -1.1
919,486 - 14143 mRNA_5775 0.68 0.5
919,515 - 14143 mRNA_5775 0.71 -0.2
919,646 - 14143 mRNA_5775 0.85 0.4
919,666 - 14143 mRNA_5775 0.88 -1.2
919,726 - -0.5
919,767 - 0.6
919,951 + 1.9
919,973 - -2.1
919,973 - 0.5
919,988 - 1.4
919,997 + 1.3
919,998 - 0.2
920,004 + -0.2
920,013 + 0.6
920,030 + 3.9
920,043 - 0.1
920,069 + -0.0
920,131 + -0.1
920,315 + 14144 mRNA_5776 0.11 0.4
920,407 - 14144 mRNA_5776 0.17 0.6
920,615 - 14144 mRNA_5776 0.29 -0.2
920,616 + 14144 mRNA_5776 0.29 -0.2
920,637 + 14144 mRNA_5776 0.31 -1.2
920,792 + 14144 mRNA_5776 0.40 0.6
920,895 + 14144 mRNA_5776 0.47 0.8
920,987 - 14144 mRNA_5776 0.52 1.5
921,239 - 14144 mRNA_5776 0.68 0.1
921,747 - 1.2
921,782 - -1.5
921,917 + -0.2
922,035 + 14145 mRNA_5777 0.12 1.2
922,192 - 14145 mRNA_5777 0.36 2.0
922,364 + 14145 mRNA_5777 0.61 0.4
922,366 + 14145 mRNA_5777 0.62 -1.6
922,378 - 14145 mRNA_5777 0.63 0.8
922,487 + 14145 mRNA_5777 0.80 -1.1