Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5775

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5774: 14142 - K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126, at 918001 to 918584 14142 mRNA_5775: 14143 - Hypothetical Protein, at 918877 to 919776 14143 mRNA_5776: 14144 - HMMPfam-Phosphatidylinositol-specific phospholipase C, X domain-PF00388,ProSiteProfiles-Phosphatidylinositol-specific phospholipase X-box domain profile.-PS50007,SUPERFAMILY--SSF51695, at 920137 to 921765 14144

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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917,901 - 0.5
918,071 - 14142 mRNA_5774 0.12 -0.1
918,359 + 14142 mRNA_5774 0.61 -0.0
918,521 + 14142 mRNA_5774 0.89 2.9
918,612 - -0.6
918,770 + 1.3
918,784 - 0.1
918,791 + 0.8
919,057 - 14143 mRNA_5775 0.20 0.8
919,209 - 14143 mRNA_5775 0.37 -1.1
919,486 - 14143 mRNA_5775 0.68 0.5
919,515 - 14143 mRNA_5775 0.71 -0.2
919,646 - 14143 mRNA_5775 0.85 0.4
919,666 - 14143 mRNA_5775 0.88 -1.2
919,726 - -0.5
919,767 - 0.6
919,951 + 1.9
919,973 - -2.1
919,973 - 0.5
919,988 - 1.4
919,997 + 1.3
919,998 - 0.2
920,004 + -0.2
920,013 + 0.6
920,030 + 3.9
920,043 - 0.1
920,069 + -0.0
920,131 + -0.1
920,315 + 14144 mRNA_5776 0.11 0.4
920,407 - 14144 mRNA_5776 0.17 0.6
920,615 - 14144 mRNA_5776 0.29 -0.2
920,616 + 14144 mRNA_5776 0.29 -0.2
920,637 + 14144 mRNA_5776 0.31 -1.2