Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5773

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5772: 14140 - BLAST m serotype precursor [Moniliophthora roreri MCA 2..., at 913489 to 916106 14140 mRNA_5773: 14141 - Hypothetical Protein, at 916684 to 917418 14141 mRNA_5774: 14142 - K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126, at 918001 to 918584 14142

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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915,967 - -1.0
916,106 - 1.5
916,121 + 1.6
916,150 - 0.3
916,160 - 1.2
916,183 - -0.7
916,266 - 0.3
916,266 - 2.8
916,266 - -0.0
916,272 + 0.2
916,277 - -0.6
916,285 + -0.1
916,286 - -0.3
916,289 + 0.2
916,296 - 0.5
916,420 + 1.2
916,427 - -0.2
916,437 - 0.3
916,448 + 1.8
916,448 - 0.2
916,449 - 2.3
916,456 + -0.2
916,481 + 3.4
916,739 + -1.9
916,748 + 0.1
916,896 - 14141 mRNA_5773 0.29 0.2
916,932 + 14141 mRNA_5773 0.34 0.3
917,052 - 14141 mRNA_5773 0.50 1.2
917,053 + 14141 mRNA_5773 0.50 1.2
917,191 - 14141 mRNA_5773 0.69 1.4
917,481 + 1.0
917,481 + 0.9
917,485 - 0.5
917,756 - 1.3
917,901 - 0.5
918,071 - 14142 mRNA_5774 0.12 -0.1
918,359 + 14142 mRNA_5774 0.61 -0.0