Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5763

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5762: 14130 - SUPERFAMILY--SSF47095, at 884263 to 884826 14130 mRNA_5763: 14131 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF51004, at 884981 to 886323 14131 mRNA_5764: 14132 - K07404 pgl 6-phosphogluconolactonase, at 886498 to 887807 14132

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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884,054 - -0.6
884,252 + 0.4
884,298 - 1.3
884,333 + 14130 mRNA_5762 0.12 -0.5
884,496 - 14130 mRNA_5762 0.41 1.3
884,655 + 14130 mRNA_5762 0.70 -0.0
884,769 - 14130 mRNA_5762 0.90 0.9
884,782 - 0.7
884,795 - 1.4
884,795 - -0.4
884,801 + -0.2
885,080 - -0.7
885,252 + 14131 mRNA_5763 0.20 -1.4
885,501 - 14131 mRNA_5763 0.39 -0.9
885,506 + 14131 mRNA_5763 0.39 2.2
885,522 - 14131 mRNA_5763 0.40 0.1
885,528 + 14131 mRNA_5763 0.41 -0.3
885,834 + 14131 mRNA_5763 0.64 0.2
886,106 + 14131 mRNA_5763 0.84 -0.1
886,107 + 14131 mRNA_5763 0.84 1.1
886,151 + 14131 mRNA_5763 0.87 0.6
886,227 - 0.4
886,229 - 0.9
886,243 - -0.1
886,257 + -0.2
886,301 - -0.9
886,374 + 0.5
886,377 + 0.9
886,395 - 1.0
886,401 + 0.3
886,406 + -0.5
886,501 + -0.2
886,641 - 14132 mRNA_5764 0.11 0.3
886,677 - 14132 mRNA_5764 0.14 0.8
886,763 + 14132 mRNA_5764 0.20 2.1
886,884 + 14132 mRNA_5764 0.29 4.6
887,180 - 14132 mRNA_5764 0.52 -1.1
887,265 + 14132 mRNA_5764 0.59 1.1
887,292 + 14132 mRNA_5764 0.61 0.8