Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5752

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5751: 14119 - K14708 SLC26A11 solute carrier family 26 (sodium-independent sulfate anion transporter), member 11, at 855663 to 858482 14119 mRNA_5752: 14120 - KOG0236 Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family), at 859339 to 859824 14120 mRNA_5753: 14121 - K17267 COPG coatomer subunit gamma, at 860617 to 864021 14121

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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858,344 - 0.1
858,468 - -0.3
858,599 - -0.6
858,627 + -1.1
858,680 - 0.1
858,712 - 0.7
858,761 + 1.5
858,761 - 2.1
858,784 + 0.2
858,787 + 2.4
858,802 - 0.3
858,812 + 0.2
858,818 + 0.8
858,914 + 0.5
858,917 - 1.0
858,925 - -1.2
858,946 - -0.5
859,002 + 0.7
859,038 - 1.4
859,041 - 0.9
859,063 + -0.1
859,106 - 0.2
859,107 + 0.2
859,235 - -0.4
859,247 + 1.0
859,250 - 0.9
859,354 + 1.9
859,357 + -0.1
859,379 - 1.4
859,524 + 14120 mRNA_5752 0.38 -1.4
859,532 - 14120 mRNA_5752 0.40 2.6
859,819 + -0.7
860,095 + 0.6
860,235 - 0.3
860,410 - 0.1