Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5725

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5724: 14092 - K05310 GPI7 ethanolaminephosphotransferase, at 776159 to 779515 14092 mRNA_5725: 14093 - K03234 EEF2 elongation factor 2, at 779611 to 783273 14093 mRNA_5726: 14094 - KOG2539 Mitochondrial/chloroplast ribosome small subunit component, at 783636 to 785944 14094

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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779,117 - 14092 mRNA_5724 0.88 -0.1
779,125 + 14092 mRNA_5724 0.88 -0.3
779,125 - 14092 mRNA_5724 0.88 -0.6
779,130 + 14092 mRNA_5724 0.89 0.9
779,288 + -0.0
779,296 + 0.5
779,298 - 0.3
779,443 + 0.6
779,571 + 1.1
779,621 + 0.9
779,624 - 0.1
779,627 + -0.0
779,630 - 2.2
779,630 - 0.3
779,635 + -0.5
779,636 - -0.4
779,639 + -0.8
779,640 - -1.5
779,658 - -0.1
780,907 - 14093 mRNA_5725 0.35 0.6
783,594 + 1.2
783,601 - 1.2
783,603 + -2.4
783,604 + 0.8