Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5723

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5722: 14090 - SUPERFAMILY--SSF52047, at 770253 to 773842 14090 mRNA_5723: 14091 - K15447 TRM44, METTL19 tRNASer (uridine44-2'-O)-methyltransferase, at 774192 to 776044 14091 mRNA_5724: 14092 - K05310 GPI7 ethanolaminephosphotransferase, at 776159 to 779515 14092

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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773,403 + 14090 mRNA_5722 0.88 -1.1
773,522 - -0.4
773,821 - 0.6
773,822 + 0.7
773,990 + 0.3
774,104 - -0.3
774,140 - 2.2
774,282 - 1.7
774,465 + 14091 mRNA_5723 0.15 2.5
775,148 - 14091 mRNA_5723 0.52 0.4
775,150 + 14091 mRNA_5723 0.52 -2.1
776,247 + 1.5
776,324 - 2.0
776,333 - 0.1
776,341 + -1.0
776,784 - 14092 mRNA_5724 0.19 -0.0
777,002 + 14092 mRNA_5724 0.25 -0.3