Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5718

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5717: 14085 - K20524 LSB5 LAS seventeen-binding protein 5, at 760959 to 763265 14085 mRNA_5718: 14086 - SUPERFAMILY--SSF50370, at 763412 to 765448 14086 mRNA_5719: 14087 - K00290 LYS1 saccharopine dehydrogenase (NAD+, L-lysine forming), at 765726 to 767088 14087

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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762,510 - 14085 mRNA_5717 0.67 -0.3
762,940 - 14085 mRNA_5717 0.86 -1.8
763,063 + 0.6
763,102 + 0.8
763,234 + -0.0
763,967 + 14086 mRNA_5718 0.27 -1.4
764,248 - 14086 mRNA_5718 0.41 -1.1
764,250 - 14086 mRNA_5718 0.41 1.8
764,673 + 14086 mRNA_5718 0.62 1.3
764,937 - 14086 mRNA_5718 0.75 -0.9
764,962 - 14086 mRNA_5718 0.76 -0.2
765,386 - 0.7
765,508 - -0.2
765,526 - 1.4
765,539 - 1.0
765,544 - 0.3
765,546 - 2.3
765,546 + 0.3
765,550 - -0.2
765,555 + 2.0
765,558 + 0.2
765,559 + 2.3
765,561 - -0.8
765,571 - 0.5
765,574 + 0.3
765,655 - 0.4
765,686 + 0.8
765,686 - 2.7
765,697 - 0.8
765,698 - 0.4
765,698 - 1.1
765,698 - -0.4
765,703 - -1.3
765,705 + 0.6
765,705 + 2.6
765,712 + -0.5
765,717 + 0.7