Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5717

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5716: 14084 - Hypothetical Protein, at 759003 to 760646 14084 mRNA_5717: 14085 - K20524 LSB5 LAS seventeen-binding protein 5, at 760959 to 763265 14085 mRNA_5718: 14086 - SUPERFAMILY--SSF50370, at 763412 to 765448 14086

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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760,159 + 14084 mRNA_5716 0.70 0.3
760,299 + 14084 mRNA_5716 0.79 0.0
760,455 + 14084 mRNA_5716 0.88 1.8
760,559 - 0.4
760,871 - 2.5
760,872 - 0.2
760,878 + 0.6
760,880 - -0.2
760,882 - 2.7
760,886 + 2.9
760,899 + 1.1
760,899 + 2.5
760,901 + -0.2
761,037 + -0.4
761,041 + 1.4
761,064 - 0.5
761,208 + 14085 mRNA_5717 0.11 1.1
761,322 - 14085 mRNA_5717 0.16 -1.9
761,325 + 14085 mRNA_5717 0.16 -1.8
761,327 - 14085 mRNA_5717 0.16 -1.1
761,613 - 14085 mRNA_5717 0.28 -0.8
761,793 + 14085 mRNA_5717 0.36 1.5
761,936 + 14085 mRNA_5717 0.42 1.6
762,366 - 14085 mRNA_5717 0.61 2.1
762,510 - 14085 mRNA_5717 0.67 -0.3
762,940 - 14085 mRNA_5717 0.86 -1.8
763,063 + 0.6
763,102 + 0.8
763,234 + -0.0
763,967 + 14086 mRNA_5718 0.27 -1.4
764,248 - 14086 mRNA_5718 0.41 -1.1
764,250 - 14086 mRNA_5718 0.41 1.8