Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5665

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5665: 14033 - K15083 RAD16 DNA repair protein RAD16, at 634205 to 636873 14033 mRNA_5666: 14034 - Hypothetical Protein, at 637260 to 638584 14034

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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633,287 + 2.0
633,552 + 0.4
633,581 + 0.1
633,799 - -0.3
633,990 - 1.1
634,167 + 0.9
634,280 + -0.1
634,534 + 14033 mRNA_5665 0.12 0.2
634,541 - 14033 mRNA_5665 0.13 -1.3
634,998 - 14033 mRNA_5665 0.30 0.0
635,001 - 14033 mRNA_5665 0.30 0.1
635,239 + 14033 mRNA_5665 0.39 1.8
635,331 - 14033 mRNA_5665 0.42 0.5
635,338 + 14033 mRNA_5665 0.42 -0.5
635,370 - 14033 mRNA_5665 0.44 -1.9
635,439 - 14033 mRNA_5665 0.46 -0.3
635,674 - 14033 mRNA_5665 0.55 0.3
635,823 - 14033 mRNA_5665 0.61 0.4
635,841 + 14033 mRNA_5665 0.61 0.2
635,887 - 14033 mRNA_5665 0.63 3.2
635,897 + 14033 mRNA_5665 0.63 -0.9
636,039 + 14033 mRNA_5665 0.69 -0.4
636,187 + 14033 mRNA_5665 0.74 0.9
636,308 + 14033 mRNA_5665 0.79 1.8
636,470 + 14033 mRNA_5665 0.85 0.0
636,595 + 14033 mRNA_5665 0.90 -1.1
636,599 + 14033 mRNA_5665 0.90 -0.9
636,752 + 0.2
637,034 - -1.0
637,064 + -0.2
637,165 - 0.2
637,167 - -0.7
637,180 + -0.4
637,180 + 0.4
637,180 + 0.6
637,180 + -2.5
637,180 + 0.5
637,181 + 0.5
637,182 - 1.4
637,182 + -1.2
637,183 + 1.1
637,183 - 0.7
637,196 - -0.6
637,335 + -0.3
637,354 - -0.4
637,359 - 1.5
637,360 - -1.4
637,412 - 14034 mRNA_5666 0.11 -0.1
637,466 + 14034 mRNA_5666 0.16 0.7
637,487 - 14034 mRNA_5666 0.17 0.4
637,493 - 14034 mRNA_5666 0.18 1.9
637,513 + 14034 mRNA_5666 0.19 -2.1
637,596 + 14034 mRNA_5666 0.25 2.7
637,654 + 14034 mRNA_5666 0.30 0.9