Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5662

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5661: 14029 - K15151 MED10, NUT2 mediator of RNA polymerase II transcription subunit 10, at 626154 to 626959 14029 mRNA_5662: 14030 - Hypothetical Protein, at 627224 to 629083 14030 mRNA_5663: 14031 - K15441 TAD2, ADAT2 tRNA-specific adenosine deaminase 2, at 629473 to 630402 14031

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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627,615 + 14030 mRNA_5662 0.21 1.2
627,765 + 14030 mRNA_5662 0.29 2.0
627,770 - 14030 mRNA_5662 0.29 -1.1
627,772 + 14030 mRNA_5662 0.29 0.7
628,024 - 14030 mRNA_5662 0.43 0.3
628,050 + 14030 mRNA_5662 0.44 0.4
628,243 - 14030 mRNA_5662 0.55 -2.1
628,274 + 14030 mRNA_5662 0.56 1.3
628,406 + 14030 mRNA_5662 0.64 2.0
628,529 + 14030 mRNA_5662 0.70 -0.5
628,568 + 14030 mRNA_5662 0.72 -1.3
628,674 - 14030 mRNA_5662 0.78 0.4
628,699 - 14030 mRNA_5662 0.79 -4.0
628,849 - 14030 mRNA_5662 0.87 0.3
628,854 + 14030 mRNA_5662 0.88 0.3
629,131 + 1.4
629,437 + 0.1