Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5659

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5658: 14026 - SUPERFAMILY--SSF52047, at 619237 to 620685 14026 mRNA_5659: 14027 - KOG2422 Uncharacterized conserved protein, at 620797 to 623499 14027 mRNA_5660: 14028 - Hypothetical Protein, at 623646 to 625624 14028

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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619,863 - 14026 mRNA_5658 0.43 1.1
619,868 - 14026 mRNA_5658 0.44 -0.9
620,046 + 14026 mRNA_5658 0.56 1.1
620,159 + 14026 mRNA_5658 0.64 1.8
620,318 - 14026 mRNA_5658 0.75 1.7
620,442 - 14026 mRNA_5658 0.83 0.5
620,449 - 14026 mRNA_5658 0.84 -0.6
620,573 - 1.5
620,591 + -0.5
620,594 + 0.3
620,612 + 0.8
620,763 - 2.1
621,188 - 14027 mRNA_5659 0.14 0.9
622,867 + 14027 mRNA_5659 0.77 1.8
622,957 - 14027 mRNA_5659 0.80 -3.0
623,688 - 0.8
623,699 + 0.5
623,704 + 0.5
623,713 + -0.7
623,722 - 0.5
623,819 - 2.3
624,235 + 14028 mRNA_5660 0.30 0.8
624,239 - 14028 mRNA_5660 0.30 -1.0
624,358 - 14028 mRNA_5660 0.36 1.4