Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5640

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5639: 14007 - SUPERFAMILY--SSF52047, at 572457 to 573872 14007 mRNA_5640: 14008 - BLAST putative acyl- dehydrogenase [Moniliophthora rore..., at 574642 to 575900 14008 mRNA_5641: 14009 - K02879 RP-L17, MRPL17, rplQ large subunit ribosomal protein L17, at 576062 to 577225 14009

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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573,851 - -0.0
573,859 + 0.3
574,045 - 1.5
574,158 - 1.1
574,168 - 0.2
574,174 + 1.2
574,177 - -1.4
574,315 - 0.3
574,336 + -0.6
574,448 + -0.3
574,468 - -0.6
574,475 + -1.8
574,477 + 0.1
574,534 - 0.9
574,605 + -0.3
574,605 - 0.2
574,790 + 14008 mRNA_5640 0.12 -0.5
575,179 - 14008 mRNA_5640 0.43 -0.2
575,669 + 14008 mRNA_5640 0.82 -0.6
575,796 - -0.6
575,826 - 0.1