Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5639

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5638: 14006 - Hypothetical Protein, at 570923 to 572239 14006 mRNA_5639: 14007 - SUPERFAMILY--SSF52047, at 572457 to 573872 14007 mRNA_5640: 14008 - BLAST putative acyl- dehydrogenase [Moniliophthora rore..., at 574642 to 575900 14008

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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571,537 - 14006 mRNA_5638 0.47 -0.1
571,544 + 14006 mRNA_5638 0.47 0.2
571,549 + 14006 mRNA_5638 0.48 0.1
572,106 - 14006 mRNA_5638 0.90 -0.8
572,267 + 1.0
572,396 - -0.2
572,567 - -0.1
572,701 - 14007 mRNA_5639 0.17 -1.3
572,730 + 14007 mRNA_5639 0.19 0.7
572,942 - 14007 mRNA_5639 0.34 0.6
573,142 + 14007 mRNA_5639 0.48 -1.2
573,275 - 14007 mRNA_5639 0.58 -1.1
573,472 - 14007 mRNA_5639 0.72 -0.7
573,568 - 14007 mRNA_5639 0.78 0.8
573,851 - -0.0
573,859 + 0.3
574,045 - 1.5
574,158 - 1.1
574,168 - 0.2
574,174 + 1.2
574,177 - -1.4
574,315 - 0.3
574,336 + -0.6
574,448 + -0.3
574,468 - -0.6
574,475 + -1.8
574,477 + 0.1
574,534 - 0.9
574,605 + -0.3
574,605 - 0.2
574,790 + 14008 mRNA_5640 0.12 -0.5