Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5626

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537330 to 538157 13993 mRNA_5626: 13994 - KOG1611 Predicted short chain-type dehydrogenase, at 538805 to 539634 13994 mRNA_5627: 13995 - K10756 RFC3_5 replication factor C subunit 3/5, at 539729 to 541360 13995

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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538,008 - 13993 mRNA_5625 0.82 2.3
538,029 + 13993 mRNA_5625 0.84 -0.4
538,095 + -0.3
538,188 - 1.3
538,540 + -0.5
538,895 - 13994 mRNA_5626 0.11 0.1
539,474 + 13994 mRNA_5626 0.81 1.4