Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5624

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534281 to 535136 13991 mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535753 to 536555 13992 mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537330 to 538157 13993

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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534,914 - 13991 mRNA_5623 0.74 1.2
534,951 - 13991 mRNA_5623 0.78 0.0
534,987 + 13991 mRNA_5623 0.82 0.1
535,219 - 0.3
535,355 + 0.6
535,365 + 1.2
535,388 + -0.6
535,444 + -1.3
535,570 + -0.3
536,367 + 13992 mRNA_5624 0.76 0.6
536,534 - 2.2
536,556 - -1.6
536,711 - -0.9
536,812 - -0.0
536,866 - -1.5
537,093 - 2.6
537,144 + 0.0
537,160 + 0.8
537,194 - -0.8