Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5619

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5618: 13986 - K09866 AQP4 aquaporin-4, at 524423 to 526190 13986 mRNA_5619: 13987 - K09885 AQPF aquaporin rerated protein, other eukaryote, at 526532 to 528365 13987 mRNA_5620: 13988 - HMMPfam-GRF zinc finger-PF06839, at 528663 to 529956 13988

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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525,712 + 13986 mRNA_5618 0.73 2.6
526,607 + 0.3
527,798 - 13987 mRNA_5619 0.69 2.0
527,873 + 13987 mRNA_5619 0.73 0.2
528,041 - 13987 mRNA_5619 0.82 0.3
528,079 + 13987 mRNA_5619 0.84 2.0
528,190 + -2.5
528,533 + 0.1
528,808 - 13988 mRNA_5620 0.11 -0.0