Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5597

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5596: 13964 - KOG2806 Chitinase, at 469041 to 471762 13964 mRNA_5597: 13965 - Hypothetical Protein, at 472641 to 473822 13965 mRNA_5598: 13966 - KOG0118 FOG RRM domain, at 474328 to 475458 13966

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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472,120 - 0.3
472,134 + 0.9
472,135 + -1.2
472,155 + -0.4
472,172 + 0.9
472,187 - 1.0
472,188 + 1.2
472,309 - 1.4
472,362 - -1.7
472,367 - 1.0
472,380 + 1.5
472,381 + 1.5
472,387 + -1.0
472,389 + -0.1
472,395 + -1.2
472,395 - 0.1
472,404 + -0.1
472,405 + 2.5
472,406 - -0.2
472,416 + 1.0
472,535 - -0.3
472,572 - 1.8
472,694 - 2.0
472,833 - 13965 mRNA_5597 0.16 -0.5
472,845 + 13965 mRNA_5597 0.17 -0.4
473,242 - 13965 mRNA_5597 0.51 0.3
473,258 + 13965 mRNA_5597 0.52 -0.3
473,450 - 13965 mRNA_5597 0.68 2.0
474,411 - 0.8