Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5591

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5591: 13959 - K11182 AOC1, ABP1 diamine oxidase, at 458129 to 461343 13959 mRNA_5592: 13960 - HMMPfam-Alcohol acetyltransferase-PF07247,SUPERFAMILY--SSF52777, at 461599 to 463064 13960

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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457,260 + 1.6
457,327 + -1.8
457,332 + -0.3
457,442 - 2.5
457,454 - 0.5
457,465 + 1.4
457,468 + 1.0
457,596 + 1.5
457,642 + 1.0
457,706 + 0.2
457,757 - 0.3
457,909 - 0.3
457,998 - -0.0
458,023 + -0.3
458,024 - -1.2
458,051 - 1.4
458,055 - 1.9
458,058 + 0.8
459,071 - 13959 mRNA_5591 0.29 0.8
459,203 + 13959 mRNA_5591 0.33 3.6
459,203 + 13959 mRNA_5591 0.33 -2.9
459,226 + 13959 mRNA_5591 0.34 -0.5
459,335 - 13959 mRNA_5591 0.38 0.1
459,384 + 13959 mRNA_5591 0.39 -0.2
459,390 - 13959 mRNA_5591 0.39 0.8
459,777 - 13959 mRNA_5591 0.51 -0.6
459,795 + 13959 mRNA_5591 0.52 2.1
460,080 - 13959 mRNA_5591 0.61 -1.1
460,085 + 13959 mRNA_5591 0.61 0.4
460,492 - 13959 mRNA_5591 0.73 2.0
460,521 - 13959 mRNA_5591 0.74 1.6
460,954 - 13959 mRNA_5591 0.88 1.5
461,214 - 0.3
461,232 - 2.6
461,497 + -1.3
461,497 + 0.5
461,562 - 2.3
461,686 - -1.0
461,697 - -1.0
461,953 - 13960 mRNA_5592 0.24 2.3
462,286 - 13960 mRNA_5592 0.47 1.5
462,330 + 13960 mRNA_5592 0.50 -0.5