Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5567

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5566: 13934 - Hypothetical Protein, at 393012 to 395471 13934 mRNA_5567: 13935 - K14394 ACP1 low molecular weight phosphotyrosine protein phosphatase, at 395599 to 396422 13935 mRNA_5568: 13936 - Hypothetical Protein, at 396764 to 397075 13936

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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394,821 - 13934 mRNA_5566 0.74 0.4
394,849 + 13934 mRNA_5566 0.75 0.3
395,212 - 13934 mRNA_5566 0.89 -0.0
395,307 - -0.6
395,313 + 2.0
395,575 + -0.2
395,624 - -0.4
395,742 + 13935 mRNA_5567 0.17 -0.9
395,762 + 13935 mRNA_5567 0.20 2.0
395,866 - 13935 mRNA_5567 0.32 -1.5
396,022 - 13935 mRNA_5567 0.51 -0.2
396,281 - 13935 mRNA_5567 0.83 0.3
396,289 - 13935 mRNA_5567 0.84 0.2
396,444 + 1.2
396,444 - -0.9
396,461 - -0.5
396,468 - 0.3
396,473 - -0.3
396,476 - 1.1
396,486 + 2.6
396,505 - 1.3
396,507 + 1.1
396,521 - -0.2
396,619 - 2.5
396,781 + 0.6
396,782 + -0.2
396,927 - 13936 mRNA_5568 0.52 1.0
397,169 - -0.8
397,209 + 1.1
397,220 - 1.3
397,324 - -1.8
397,343 - -0.9
397,346 + 0.1
397,347 + 1.3
397,371 - 0.8