Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5564

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5563: 13931 - K10756 RFC3_5 replication factor C subunit 3/5, at 385624 to 387371 13931 mRNA_5564: 13932 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 387473 to 390458 13932

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
387,517 + -1.3
387,517 - -0.4
387,622 + 1.6
387,951 - 13932 mRNA_5564 0.16 2.8
388,072 - 13932 mRNA_5564 0.20 -0.4
388,402 - 13932 mRNA_5564 0.31 1.8
388,457 + 13932 mRNA_5564 0.33 -0.2
388,476 - 13932 mRNA_5564 0.34 -0.1
388,622 + 13932 mRNA_5564 0.38 -0.2
388,809 - 13932 mRNA_5564 0.45 0.9
388,856 + 13932 mRNA_5564 0.46 0.1
388,937 - 13932 mRNA_5564 0.49 0.0
389,009 + 13932 mRNA_5564 0.51 2.5
389,301 + 13932 mRNA_5564 0.61 1.3
389,550 - 13932 mRNA_5564 0.70 0.1
389,606 - 13932 mRNA_5564 0.71 -2.2
389,824 + 13932 mRNA_5564 0.79 -0.0
389,873 + 13932 mRNA_5564 0.80 0.2
390,281 - 0.4
390,607 - -0.1
390,768 - -0.4
391,031 + 0.3
391,042 - 0.7
391,195 + -0.3
391,195 + 0.3
391,305 + 1.6
391,306 + -1.8
391,319 - -0.1
391,326 + -0.8
391,328 - -1.1
391,343 - 0.7
391,381 - 0.8
391,401 + 1.3
391,401 + 0.7
391,419 - -0.1
391,420 - 0.6
391,438 + 0.5
391,447 - 0.9
391,454 - -0.0
391,454 - 0.6