Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5560

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5559: 13927 - KOG2406 MADS box transcription factor, at 377772 to 380881 13927 mRNA_5560: 13928 - BLAST PROTEIN D2013.6 [Ceraceosorus bombacis], at 380962 to 381944 13928 mRNA_5561: 13929 - Hypothetical Protein, at 382634 to 383572 13929

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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380,895 + 1.5
380,903 - -0.0
380,906 + 0.0
380,920 - 0.3
381,183 - 13928 mRNA_5560 0.22 -2.4
381,633 - 13928 mRNA_5560 0.68 -0.6
381,927 + -0.6
382,093 - 1.1
382,263 + 0.2
382,330 + -0.7
382,902 - 13929 mRNA_5561 0.29 0.2